Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902759.1_cds_XP_016452765.1_46969
CDS Infomation

[gene=LOC107777282] [db_xref=GeneID:107777282] [protein=pectinesterase-like] [protein_id=XP_016452765.1] [location=complement(join(88082..88773,90647..90994,91740..92478))] [gbkey=CDS]
Sequence

ATGACTTTCAAAGAATTCTTAGCCGGAATAACAGATTCTGGCAAACACACAAATTCTTTT
CCAATGTTAAAAAGACCAAAACTCTTTTTATCCCTCATTGCCTCTATCCTACTAATTGCT
GCAGTCATTGGAGTCGTTGTTGGAGTAAACTCACGAAAAAATAGCTCAAATCAAGCCCAA
ATCGAGGCCATTTCATTGGCAACTCATACCATAGTAAAATCCTCATGTAGCATCACTTTA
CACCAAGAACTATGCTACTCTACAATTGCAAATAATATCCCAAACTCCTCCAAAAAAGTC
ACAAACCAAAAGGATGTCATTGAATTGTCCTTGAATATTACAACTAAGGCCGTTCAACGC
AACTACTACGCCATAGACAAGCTAGTAAAAACACGAAAGGGTTTAACAGAACGCGAAAAA
ATCGCGTTACACGATTGTTTAGAGACGATAGACGAGACTATTGATGAGCTTCACACAGCC
GTTGAAGATTTGGAAAAATATCCTAATGCTAAGTCGTTGAGACAACATGCAGATGATTTG
AAAACTTTAATTAGTGCTGCTATTACTAATCAAGAGACTTGTCTTGACGGGTTTTCACAT
GATGAAGCTGATAAAAAAGTTCGTAAGATTTTGCTCAAAGGGCAAGTGTATGTGGAGAAA
TTGTGCAGTAATGCTTTAGCCATGATTAAGAACATGACTGATACAGATATTCAGAATGAG
ATGAAGTTAGTTGCTTCAGGTAAAGTGAAGAGAAAACTCAATGAGGAAAGCAGTGGAACA
TGGCCGGAGTGGTTGTCTACCGGAGATAGAAGACTGCTGCAATCACCGTCAGTGACGGCG
GATGTGGTGGTAGCGGCAGATGGAAGCGGAGACTACAAGACGGTGGCTGAAGCAGTAGCT
AACGCACCTGAAAAGAGTAGCAAGAGATATGTGATAAGAATAAAAGCAGGTGTTTACAAA
GAAAATGTGGAGGTGTCAAAGAAGAAGAAGAACATAATGTTTATGGGAGATGGTAGAGAG
AATACTATTATTACTGGAAGCAGGAATGTCAAAGATGGTAGCACTACTTTCCATTCTGCC
ACTGTTGCCGCAGTGAGAGAAGGGTTCTTAGCCAGAGACATAACATTCGAAAACACAGCA
GGGCACGAAAAGCACCAAGCAGTTGCACTTCGCGTAGGTGCCGATTTATCCGCCTTCTAC
AAATGTGACATGTTAGGCTACCAAGACACTCTCTACGTCCACTCCAATCGTCAATTCTTC
GTCCAATGTTTCATTTCAGGCACAGTCGATTTCATCTTTGGCAATGCCGCAGCCGTACTC
CAGGACTGCGACATCCACGCCAGACGTCCAGGGCCGGGCCAGAAGAACATGGTCACGGCC
CAAGGGCGTAAGGATCCCAACCAAAACACTGGGATCGTGATTCAGAAATCTAGAATTGGC
GCTACTTCAGACTTGAAATCAGTTCAGAAAAATTTTCCTACGTATTTAGGACGGCCGTGG
AAGGAATATTCTAGGACTGTGATCATGCAATGTTCGATCGCGGATGTGATTAGTCCGACA
GGATGGCACGAGTGGAATGGGGATTTTGCACTTGATACGTTGTTTTATGGGGAATATGAG
AATACAGGTGCCGGAGCTGGGACATCGGGGAGAGTGAAATGGAAAGGTTTTAAAGTTATT
ACTAGTGCAACTGAGGCTCAAGATTATACTCCTAACAAGTTTATTGCTGGAAATAGTTGG
TTGAGCTCCACTGGTTTTCCTTTTGCTCTTGGTCTTTAA

Peptide Sequence

PEP ID

XP_016452765.1
PEP Infomation

PREDICTED: pectinesterase-like [Nicotiana tabacum]
Sequence

MTFKEFLAGITDSGKHTNSFPMLKRPKLFLSLIASILLIAAVIGVVVGVNSRKNSSNQAQ
IEAISLATHTIVKSSCSITLHQELCYSTIANNIPNSSKKVTNQKDVIELSLNITTKAVQR
NYYAIDKLVKTRKGLTEREKIALHDCLETIDETIDELHTAVEDLEKYPNAKSLRQHADDL
KTLISAAITNQETCLDGFSHDEADKKVRKILLKGQVYVEKLCSNALAMIKNMTDTDIQNE
MKLVASGKVKRKLNEESSGTWPEWLSTGDRRLLQSPSVTADVVVAADGSGDYKTVAEAVA
NAPEKSSKRYVIRIKAGVYKENVEVSKKKKNIMFMGDGRENTIITGSRNVKDGSTTFHSA
TVAAVREGFLARDITFENTAGHEKHQAVALRVGADLSAFYKCDMLGYQDTLYVHSNRQFF
VQCFISGTVDFIFGNAAAVLQDCDIHARRPGPGQKNMVTAQGRKDPNQNTGIVIQKSRIG
ATSDLKSVQKNFPTYLGRPWKEYSRTVIMQCSIADVISPTGWHEWNGDFALDTLFYGEYE
NTGAGAGTSGRVKWKGFKVITSATEAQDYTPNKFIAGNSWLSSTGFPFALGL

Transcript Sequence

Gene sequence data has not been registered.